Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| PAAD | rs114536396 | chr1:227536087 | C/G | 1.03E-5 | 175 | 15.55 | 15.65 | 3.9 | KM Plot |
| PAAD | rs114537871 | chr1:227560794 | G/A | 6.96E-5 | 176 | 15.4 | 16.45 | 3.9 | KM Plot |
| PAAD | rs114597547 | chr17:27107859 | C/G | 1.33E-5 | 177 | 15.42 | 16.05 | 3.67 | KM Plot |
| PAAD | rs114615510 | chr1:227458073 | G/A | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs114683993 | chr1:227383157 | G/A | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs114689649 | chr1:16827104 | A/G | 1.17E-5 | 170 | 15.43 | 16.03 | 4.62 | KM Plot |
| PAAD | rs114772174 | chr1:227564515 | T/G | 6.96E-5 | 176 | 15.4 | 16.45 | 3.9 | KM Plot |
| PAAD | rs114967166 | chr1:227288330 | G/A | 3.2E-5 | 178 | 15.53 | 15.65 | 3.9 | KM Plot |
| PAAD | rs115037090 | chr1:227666191 | A/G | 5.58E-13 | 178 | 15.33 | 15.97 | 1.37 | KM Plot |
| PAAD | rs115058698 | chr1:227483194 | C/T | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs1150806 | chr6:44897787 | C/T | 0.000164 | 178 | 16.6 | 15.67 | 13.13 | KM Plot |
| PAAD | rs11511395 | chr10:102945191 | C/T | 1.27E-7 | 173 | 15.82 | 13.6 | 3.17 | KM Plot |
| PAAD | rs115128840 | chr1:227422406 | T/C | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs11516935 | chr10:102947576 | G/A | 1.56E-7 | 172 | 15.82 | 14.03 | 3.17 | KM Plot |
| PAAD | rs11517074 | chr10:102945434 | C/G | 1.27E-7 | 173 | 15.82 | 13.6 | 3.17 | KM Plot |